TY - BOOK AU - Torkamaneh,Davoud and Belzile, François TI - Genome Wide Association Studies SN - 9781071622391 (pbk.) U1 - 572.86 TOR/G PY - 2022/// CY - New York PB - Humana Press KW - Genome KW - Plant Laboratory Manual KW - Laboratory manuals N1 - Contents: 1. Designing a Genome-Wide Association Study: Main Steps and Critical Decisions 2. Preparation and Curation of Phenotypic Datasets 3. Genotyping Platforms for Genome-Wide Association Studies: Options and Practical Considerations 4. Genome-Wide Association Study Statistical Models: A Review 5. Interpretation of Manhattan Plots and Other Outputs of Genome-Wide Association Studies 6. Preparation and Curation of Multi-Year, Multi-Location, Multi-Trait Datasets 7. Development, Preparation, and Curation of High-Throughput Phenotypic Data for Genome-Wide Association Studies: A Sample Pipeline in R 8. Preparation and Curation of Omics Data for Genome-Wide Association Studies 9. Producing High-Quality Single Nucleotide Polymorphism Data for Genome-Wide Association Studies 10. A Practical Guide to Using Structural Variants for Genome-Wide Association Studies 11. Data Integration, Imputation, and Meta-Analysis for Genome-Wide Association Studies 12. Population Structure and Relatedness for Genome-Wide Association Studies 13. Performing Genome-Wide Association Studies with Multiple Models Using GAPIT 14. Performing Genome-Wide Association Studies Using rMVP 15. Identification and Validation of Candidate Genes from Genome-Wide Association Studies 16. Biparental Crossing and QTL Mapping for Genome-Wide Association Studies Validation 17. Development of Breeder Friendly KASP Markers from Genome-Wide Association Studies Results 18. Mapping Major Disease Resistance Genes in Soybean by Genome-Wide Association Studies 19. GWAS Case Studies in Wheat 20. Plant Microbiome-Based Genome-Wide Association Studies ER -